The detailed information of tRNA gene sequence


Sequence ID>SRA1016533
Genome IDSRR023846.546608
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 33
End posion on genome 117
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
accggccgct
tRNA gene sequence 
GCCCCTGTGGCGAAATTGGTAGACGCGACCGACTCAAAATCGGTTGCCGCAAGGCATGCT
GGTTCGATTCCGGCCAGGGGCACCA
Downstream region at tRNA end position 
accgctaatt
Secondary structure (Cloverleaf model)
>SRA1016533	Leu	CAA
                   t      ACCA accgctaatt
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A
                     G - C          T T
                    T     C G G C C     A
      T A A        G      | | + | |     G
    T       A G C G       G C T G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TGCCGCAAGGCAT
                    A - T
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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