The detailed information of tRNA gene sequence


Sequence ID>SRA1016540
Genome IDSRR023846.551914
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 34
End posion on genome 109
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
ccgtcatcgg
tRNA gene sequence 
GCCGCTTTAGCTCAGCTGGTAGAGCATCGCATTCGTAATGCGGGGGTCACAGGTTCGAGT
CCTGTAAGCGGCACCA
Downstream region at tRNA end position 
tactacagaa
Secondary structure (Cloverleaf model)
>SRA1016540	Thr	CGT
                   g      ACCA tactacagaa
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     T - A
                     T - A          T G
                    T     T G T C C     A
      C G A        A      | | | | |     G
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    A - T
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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