The detailed information of tRNA gene sequence


Sequence ID>SRA1016542
Genome IDSRR023846.552361
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 146
End posion on genome 222
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tcctgggctc
tRNA gene sequence 
GGCTCTTTAGCTCAGTCGGTTAGAGCGATGGAATCATAATCCACAGGTCCGCGGTTCGAA
TCCGTGAAGAGCCACCA
Downstream region at tRNA end position 
acnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1016542	Met	CAT
                   c      ACCA acnnnnnnnn
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     T - A
                     T - A          T A
                    T     G T G C C     A
      T G A        A      | + | | |     G
    C       C T C G       C G C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    A   C
                    T - A
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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