The detailed information of tRNA gene sequence


Sequence ID>SRA1016543
Genome IDSRR023846.552711
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 232
End posion on genome 160
Amino Acid Ile
Anticodon AAT
Upstream region at tRNA start position 
ttcgagtgcc
tRNA gene sequence 
GGTCGTATAGCTCAGTCGGTAGAGCACAGTGCTAATAACGCTGCGGTCCAGGGTTCGAGC
CCCTGTATGACCAttt
Downstream region at tRNA end position 
tgccgctttt
Secondary structure (Cloverleaf model)
>SRA1016543	Ile	AAT
                   c      Attt tgccgctttt
                     G - C
                     G - C
                     T - A
                     C - G
                     G + T
                     T - A
                     A - T          C G
                    T     G T C C C     A
      T G A        A      | | | | |     G
    C       C T C G       C A G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     CGGTC
                    C - G
                    A - T
                    G - C
                    T + G
                    G - C
                  C       A
                  T       A
                    A A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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