The detailed information of tRNA gene sequence


Sequence ID>SRA1016544
Genome IDSRR023846.553034
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 210
End posion on genome 134
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
gagacggcgg
tRNA gene sequence 
GCACCCGTAGCTCAGCTGGATAGAGCAAGGAGCTTCTACCTCCTTGGTCGGGGGTTCGAA
TCCCTCCGGGTGCACCA
Downstream region at tRNA end position 
ttctcttgtt
Secondary structure (Cloverleaf model)
>SRA1016544	Arg	TCT
                   g      ACCA ttctcttgtt
                     G - C
                     C - G
                     A - T
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C T C C C     A
      C G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     TGGTC
                    A - T
                    G - C
                    G - C
                    A - T
                    G - C
                  C       C
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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