The detailed information of tRNA gene sequence


Sequence ID>SRA1016546
Genome IDSRR023846.556687
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 189
End posion on genome 114
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
tgaaacgatt
tRNA gene sequence 
GGGGCTTTAGCTCAGCTGGGAGAGCACCTGCTTTGCAAGCAGGGGGTCAACGGTTCGATC
CCGTTAAGCTCCACCA
Downstream region at tRNA end position 
tatttggtcc
Secondary structure (Cloverleaf model)
>SRA1016546	Ala	TGC
                   t      ACCA tatttggtcc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     T - A          C T
                    T     T T G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A A C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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