The detailed information of tRNA gene sequence


Sequence ID>SRA1016548
Genome IDSRR023846.558177
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 179
End posion on genome 92
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cagtcttttt
tRNA gene sequence 
AGAGAAGTGGCAGAGTGGTCGATTGCGGCGGTCTTGAAAACCGCTGACTGTAACAGGTCC
GGGGGTTCGAATCCCTCCTTCTCTGCTA
Downstream region at tRNA end position 
aaaggcccct
Secondary structure (Cloverleaf model)
>SRA1016548	Ser	TGA
                   t      GCTA aaaggcccct
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G       + | | |                 T T
    T       T T G C
      C G A        G     TGACTGTAACAGGTCC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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