The detailed information of tRNA gene sequence


Sequence ID>SRA1016551
Genome IDSRR023846.560576
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 226
End posion on genome 151
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
caccctcgat
tRNA gene sequence 
GGGCGTATAGCTCAGCTGGGAGAGCGCTTGCATGGCATGCAAGAGGTCAGCGGTTCGATC
CCGCTTAGCTCCACCA
Downstream region at tRNA end position 
aatctttctc
Secondary structure (Cloverleaf model)
>SRA1016551	Ala	GGC
                   t      ACCA aatctttctc
                     G - C
                     G - C
                     G + T
                     C   C
                     G   G
                     T - A
                     A - T          C T
                    T     T C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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