The detailed information of tRNA gene sequence


Sequence ID>SRA1016552
Genome IDSRR023846.560909
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 134
End posion on genome 208
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
gcgaagacat
tRNA gene sequence 
CGGGGTGTGGCGCAGCTTGGTAGCGCGCCTCGTTCGGGACGAGGAGGTCGTGGGTTCGAA
TCCCGCTACCCCGACac
Downstream region at tRNA end position 
gaaattggtc
Secondary structure (Cloverleaf model)
>SRA1016552	Pro	CGG
                   t      ACac gaaattggtc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G + T          T A
                    T     C G C C C     A
      C G A        G      | + | | |     G
    T       C G C G       G T G G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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