The detailed information of tRNA gene sequence


Sequence ID>SRA1016554
Genome IDSRR023846.562660
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 112
End posion on genome 187
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
gtcccgatca
tRNA gene sequence 
GGGCGATTGGCGCAGTTGGTAGCGCGCTTCCTTCACACGGAAGAGGTCATCGGTTCGAGT
CCGGTATCGCCCACCA
Downstream region at tRNA end position 
cgtagttccc
Secondary structure (Cloverleaf model)
>SRA1016554	Val	CAC
                   a      ACCA cgtagttccc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          T G
                    T     T G G C C     A
      T G A        G      | + | | |     G
    T       C G C G       A T C G G     C
    G       | | | |                 T T
    G       G C G C
      T A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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