The detailed information of tRNA gene sequence


Sequence ID>SRA1016556
Genome IDSRR023846.564879
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 210
End posion on genome 122
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cgccgcatcc
tRNA gene sequence 
GGAGACGTGGGTGAGTGGCTGAACCAACGCTTTGCTAAAGCGTCGTACGGGAAACCGTAC
CGAGGGTTCGAATCCCTCCGTCTCCGCCA
Downstream region at tRNA end position 
gcgtcactcc
Secondary structure (Cloverleaf model)
>SRA1016556	Ser	GCT
                   c      GCCA gcgtcactcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G A G G G     C
    G         | | |                 T T
    C       A A C C
      T G          A     CGTACGGGAAACCGTACC
                    A - T
                    C - G
                    G - C
                    C - G
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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