The detailed information of tRNA gene sequence


Sequence ID>SRA1016578
Genome IDSRR027355.28523
Search identical group
Phylum/ClassInvestigation of prokaryote diversity in the sub-seafloor biosphere by 16S rRNA gene tag (V6) sequencing (SRP001218)
Species
Start position on genome 76
End posion on genome 149
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
tagtcatatt
tRNA gene sequence 
GAGGCTGTAGCTCAGTCGGTAGAGCAACGGACTTTTAATCCGTAGGTCCAGGGTTCAAGT
CCCTGCAGCCTCACtg
Downstream region at tRNA end position 
tgaacattcg
Secondary structure (Cloverleaf model)
>SRA1016578	Lys	TTT
                   t      ACtg tgaacattcg
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C          T G
                    T     G T C C C     A
      T G A        A      | | | | |     A
    C       C T C G       C A G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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