The detailed information of tRNA gene sequence


Sequence ID>SRA1016613
Genome IDSRR027367.15655
Search identical group
Phylum/ClassAnalysis of diversity of coastal microbial mats using 454 technology (SRP001219)
Species
Start position on genome 67
End posion on genome 143
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position
gggacatgtg
tRNA gene sequence
GCGACCGTAGCTCAGTTGGTTAGAGCGCCGGTTTGTGGTACCGGAGGTCGCGGGTTCGAA
CCCCGTCGGTCGCCCCA
Downstream region at tRNA end position
tcatccccct
Secondary structure (Cloverleaf model)
>SRA1016613	His	GTG
                   g      CCCA tcatccccct
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G
                     C - G
                     G - C          C A
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  T       T
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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