The detailed information of tRNA gene sequence


Sequence ID>SRA1016637
Genome IDSRR027369.43421
Search identical group
Phylum/ClassAnalysis of diversity of coastal microbial mats using 454 technology (SRP001219)
Species
Start position on genome 153
End posion on genome 228
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
gcgcccgggc
tRNA gene sequence 
GCCGCTGTAGCTCAGCTGGTAGAGCACGTCATTCGTAATGATGGGGTCGGGGGTTCGAGT
CCCTTCAGCGGCACCA
Downstream region at tRNA end position 
cttgtccata
Secondary structure (Cloverleaf model)
>SRA1016637	Thr	CGT
                   c      ACCA cttgtccata
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     T - A
                     G - C          T G
                    T     T T C C C     A
      C G A        A      + + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    C - G
                    G + T
                    T - A
                    C - G
                    A - T
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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