The detailed information of tRNA gene sequence


Sequence ID>SRA1016641
Genome IDSRR027369.46848
Search identical group
Phylum/ClassAnalysis of diversity of coastal microbial mats using 454 technology (SRP001219)
Species
Start position on genome 158
End posion on genome 233
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position
aaatcgtatg
tRNA gene sequence
GCGGGCGTAGCCAAGTGGTTAAGGCAGTGGATTGTGGTTCCACCATTCGTGGGTTCGAGT
CCCATCGTTCGCCCTA
Downstream region at tRNA end position
ttcgtaaacc
Secondary structure (Cloverleaf model)
>SRA1016641	His	GTG
                   g      CCTA ttcgtaaacc
                     G - C
                     C - G
                     G - C
                     G + T
                     G + T
                     C - G
                     G - C          T G
                    T     T A C C C     A
      T G A        A      + | | | |     G
    G       A C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T A          A     CATTC
                    G - C
                    T - A
                    G - C
                    G - C
                    A - T
                  T       T
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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