The detailed information of tRNA gene sequence


Sequence ID>SRA1016667
Genome IDSRR027673.20357
Search identical group
Phylum/ClassThe LACAr cooperative project: microbial diversity in coastal systems along a latitudinal gradient from South Atlantic to the Caribbean (SRP001244)
Species
Start position on genome 19
End posion on genome 94
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position
tggagtcaac
tRNA gene sequence
GCCGGCATAGCTCAGCAGGTAGAGCAACTGATTTGTAATCAGTAGGTCCCGAGTTCGATT
CTTGGTGCCGGCACCA
Downstream region at tRNA end position
tattttggat
Secondary structure (Cloverleaf model)
>SRA1016667	Thr	TGT
                   c      ACCA tattttggat
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     C - G
                     A - T          T T
                    T     G G T T C     A
      C G A        A      | | + | |     G
    A       C T C G       C C G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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