The detailed information of tRNA gene sequence


Sequence ID>SRA1016668
Genome IDSRR027673.22166
Search identical group
Phylum/ClassThe LACAr cooperative project: microbial diversity in coastal systems along a latitudinal gradient from South Atlantic to the Caribbean (SRP001244)
Species
Start position on genome 91
End posion on genome 15
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
gattttataA
tRNA gene sequence 
GCGCCGGTAGCCAAATGGATTAAGGCATCAGATTTCTACTCTGACGATTTGGGGGTTCGA
ATCCCTCCCGGCGTTGac
Downstream region at tRNA end position 
tccaattgca
Secondary structure (Cloverleaf model)
>SRA1016668	Arg	TCT
                   A      TGac tccaattgca
                     G + T
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T A A        A      | + | | |     G
    G       A C C G       G G G G G     C
    G         | | |                 T T
    A       A G G C
      T T A        A     CGATTT
                    T - A
                    C - G
                    A - T
                    G - C
                    A - T
                  T       C
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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