The detailed information of tRNA gene sequence


Sequence ID>SRA1016794
Genome IDSRR035082.31525
Search identical group
Phylum/Class454 Sequencing (SRP001803)
Species
Start position on genome 298
End posion on genome 211
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
caataaatat
tRNA gene sequence 
GCAATGGTCGGCTAGCGGTCTAGGCCACAACCCTTTCAAGGTTGCGTTCGTAAGAACATC
GTGGGTTCGAATCCCATCCATTGTACAA
Downstream region at tRNA end position 
ttaggtttta
Secondary structure (Cloverleaf model)
>SRA1016794	Glu	TTC
                   t      ACAA ttaggtttta
                     G + T
                     C - G
                     A - T
                     A - T
                     T - A
                     G - C
                     G - C          T A
                    T     T A C C C     A
      C G A        C      + | | | |     G
    G       T C G G       G T G G G     C
    G       + | | |                 T T
    T       G G C C
      C T A        A     CGTTCGTAAGAACATC
                    C - G
                    A - T
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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