The detailed information of tRNA gene sequence


Sequence ID>SRA1016873
Genome IDSRR035082.45881
Search identical group
Phylum/Class454 Sequencing (SRP001803)
Species
Start position on genome 218
End posion on genome 292
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cctttaacaT
tRNA gene sequence 
GGTTACTTAGCTCAAGGGGAGAGCATCTGGCTCCAGACCAGAAGGTGTATGGGTTCGATT
CCCATAGTAGCCATtt
Downstream region at tRNA end position 
tacttatata
Secondary structure (Cloverleaf model)
>SRA1016873	Trp	CCA
                   T      ATtt tacttatata
                     G - C
                     G - C
                     T + G
                     T - A
                     A - T
                     C - G
                     T - A          T T
                    T     T A C C C     A
        A A        A      | | | | |     G
      G     C T C G       A T G G G     C
      G     | | | |                 T T
      G     G A G C
        G A        A     AGGTGT
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  C       A
                  T       G
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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