The detailed information of tRNA gene sequence


Sequence ID>SRA1017227
Genome IDSRR035082.103116
Search identical group
Phylum/Class454 Sequencing (SRP001803)
Species
Start position on genome 240
End posion on genome 166
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tgaaaatttc
tRNA gene sequence 
GCCAGGGTAGCTCAACGGTGGAGCAGAATCTTCATAAGGTTAAGGCTGCGGGTTCGACTC
CCGCCCCTGGCACAA
Downstream region at tRNA end position 
aaaacccggc
Secondary structure (Cloverleaf model)
>SRA1017227	Met	CAT
                   c      ACAA aaaacccggc
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C          T C
                    T     C G C C C     A
        A A        A      | | | | |     G
      C     C T C G       G C G G G     C
      G     | | | |                 T T
      G     G A G C
        T G        A     AGGCT
                    G   A
                    A - T
                    A - T
                    T + G
                    C - G
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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