The detailed information of tRNA gene sequence


Sequence ID>SRA1017377
Genome IDSRR035082.130004
Search identical group
Phylum/Class454 Sequencing (SRP001803)
Species
Start position on genome 104
End posion on genome 197
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agggagattt
tRNA gene sequence 
GGAGAGGTGCCGGAGCATGGTTGAACGGGAGAGTTTGCTAAACTCTTATAGGGTGTAATA
GCTCTATCGTGGGTTCGAATCCCACCCTCTCCGCac
Downstream region at tRNA end position 
taaannnnnn
Secondary structure (Cloverleaf model)
>SRA1017377	Ser	GCT
                   t      GCac taaannnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    A C G A        G      | | | | |     G
  T         G G C C       G T G G G     C
  G           | | |                 T T
  G         A C G G
    T T G A        G     TATAGGGTGTAATAGCTCTATC
                    A - T
                    G - C
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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