The detailed information of tRNA gene sequence


Sequence ID>SRA1017406
Genome IDSRR035082.133835
Search identical group
Phylum/Class454 Sequencing (SRP001803)
Species
Start position on genome 135
End posion on genome 221
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gagataaaaa
tRNA gene sequence 
GGAAGAATGCTAGAATTGGTAAATAGGGCGGTTTGCTAAACCGTTGGGGTAACTCCCACG
TAGGTTCGAGCCCTGCTCCTTCCGCCA
Downstream region at tRNA end position 
ttggaaggtt
Secondary structure (Cloverleaf model)
>SRA1017406	Ser	GCT
                   a      GCCA ttggaaggtt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A   C
                     A - T          C G
                    T     C G T C C     A
      T A A        G      | + | | |     G
    T       G A T C       G T A G G     C
    G         | | |                 T T
    G       A T A G
      T A A        G     TGGGGTAACTCCCAC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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