The detailed information of tRNA gene sequence


Sequence ID>C151008423
Genome IDCP006008
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesVibrio parahaemolyticus O1:K33 str. CDC_K4557 [CP006007, CP006008]
Start position on genome 201149
End posion on genome 201240
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
caatgaaaac
tRNA gene sequence 
GGTGAGGTGGCCGAGAGGCTGAAGGCGCTCCCCTGCTAAGGGAGTATACGGTTTATCCCG
TATCGAGGGTTCGAATCCCTCCTTCACCGCCA
Downstream region at tRNA end position 
ttcattgact
Secondary structure (Cloverleaf model)
>C151008423	Ser	GCT
                   c      GCCA ttcattgact
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G + T
                     G - C          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATACGGTTTATCCCGTATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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