The detailed information of tRNA gene sequence


Sequence ID>SRA1017855
Genome IDSRR035082.206952
Search identical group
Phylum/Class454 Sequencing (SRP001803)
Species
Start position on genome 307
End posion on genome 380
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ctaacagcga
tRNA gene sequence 
GGGGGCGTCGGTTAATGGTAAACCATGGGACTCCAAATCCCAGACTGGGGGTTCGATTCC
CTCCGCCCCTGCCC
Downstream region at tRNA end position 
acgcagtttt
Secondary structure (Cloverleaf model)
>SRA1017855	Trp	CCA
                   a      GCCC acgcagtttt
                     G + T
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T T
                    T     C T C C C     A
        A A        C      | + | | |     G
      T     T T G G       G G G G G     C
      G     | | | |                 T T
      G     A A C C
        T A        A     GACT
                    T - A
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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