The detailed information of tRNA gene sequence


Sequence ID>SRA1018158
Genome IDSRR035082.248997
Search identical group
Phylum/Class454 Sequencing (SRP001803)
Species
Start position on genome 259
End posion on genome 168
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aaaaagtatt
tRNA gene sequence 
GGAAGGGTCGCGATAGTGGTCTAGTGCGCTTGCTTGGAGTGCAAGTGTCCGTTCATAGCG
GACCGCGAGTTCGAATCTCGCCCCTTCCGCCA
Downstream region at tRNA end position 
tccttcgcca
Secondary structure (Cloverleaf model)
>SRA1018158	Ser	GGA
                   t      GCCA tccttcgcca
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C G C T C     A
    T G A T        C      | | | | |     G
  G         A G C G       G C G A G     C
  G           + | |                 T T
  T         G T G C
    C T A          G     TGTCCGTTCATAGCGGACC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  T       T
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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