The detailed information of tRNA gene sequence


Sequence ID>C151016190
Genome IDCP007029
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesThioalkalivibrio paradoxus ARh 1 [CP007029]
Start position on genome 1989049
End posion on genome 1988959
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cccccagttc
tRNA gene sequence 
GGAGAGATGGCCGAGTGGTCGAAGGCGCTCCCCTGCTAAGGGAGTATGGGTCAAAAGCCC
ATCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
ctctctacga
Secondary structure (Cloverleaf model)
>C151016190	Ser	GCT
                   c      GCCA ctctctacga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TATGGGTCAAAAGCCCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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