The detailed information of tRNA gene sequence


Sequence ID>SRA1018859
Genome IDSRR035082.359138
Search identical group
Phylum/Class454 Sequencing (SRP001803)
Species
Start position on genome 395
End posion on genome 325
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
nnnnnaacat
tRNA gene sequence 
GGGTCTGTAGCTAAGTGGTAAAGCACTCGCCTGCAGAGCGATGATCCCCGGTTCAAATCC
GGGCAGGCCCTtat
Downstream region at tRNA end position 
ttttaaattc
Secondary structure (Cloverleaf model)
>SRA1018859	Cys	GCA
                   t      Ttat ttttaaattc
                     G - C
                     G - C
                     G - C
                     T + G
                     C - G
                     T - A
                     G - C          T A
                    T     G G G C C     A
        G A        A      | | | | |     A
      T     A T C G       C C C G G     C
      G       | | |                 T T
      G     A A G C
        T A        A     GATC
                    C   T
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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