The detailed information of tRNA gene sequence


Sequence ID>SRA1018886
Genome IDSRR035082.363372
Search identical group
Phylum/Class454 Sequencing (SRP001803)
Species
Start position on genome 199
End posion on genome 109
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaaattataT
tRNA gene sequence 
CGCGGGGTCGAGTAGTCTGGTTTAGCTCACTGGTCTCATAAGCCAGTATGATAGAAATAT
CTGCGTTGGTTCAAATCCAACCCCCGCTATta
Downstream region at tRNA end position 
atggaagcgc
Secondary structure (Cloverleaf model)
>SRA1018886	Met	CAT
                   T      ATta atggaagcgc
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A A C C     A
    C T G A        C      | | | | |     A
  T         T G A G       G T T G G     C
  G         + | | |                 T T
  G         G C T C
    T T T A        A     TATGATAGAAATATCTGC
                    C - G
                    T - A
                    G - C
                    G - C
                    T + G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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