The detailed information of tRNA gene sequence


Sequence ID>SRA1020688
Genome IDSRR035083.151589
Search identical group
Phylum/Class454 Sequencing (SRP001804)
Species
Start position on genome 521
End posion on genome 436
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
TGGAAGTTGCCAGGAGCGGTAATGGAGCAGATTGCTAATCTGTAGCCTCTTAATTGGGGT
CAGGGGTTCGATTCCTCTACTTTCCGaat
Downstream region at tRNA end position 
atcgcacttt
Secondary structure (Cloverleaf model)
>SRA1020688	Ser	GCT
                   n      Gaat atcgcacttt
                     T   C
                     G - C
                     G + T
                     A - T
                     A - T
                     G - C
                     T - A          T T
                    T     T C T C C     A
      G A G        G      | | + | |     G
    C       G A C C       A G G G G     C
    G         | | |                 T T
    G       A T G G
      T A          A     AGCCTCTTAATTGGGGTC
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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