The detailed information of tRNA gene sequence


Sequence ID>C151078474
Genome IDCP011232
Search identical group
Phylum/ClassThermotogota
SpeciesKosmotoga pacifica SLHLJ1 [CP011232]
Start position on genome 2115602
End posion on genome 2115515
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tttattgttc
tRNA gene sequence 
GGAGGCGTATCCTAATCGGCTAAGGAGCCGGTCTCGAAAACCGGTGGGGCATTGCCCCTT
GTGGGTTCGAGTCCCACCGCCTCCGCCA
Downstream region at tRNA end position 
gagggcggtg
Secondary structure (Cloverleaf model)
>C151078474	Ser	CGA
                   c      GCCA gagggcggtg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C A C C C     A
      T A A        A      | | | | |     G
    C       T C C T       G T G G G     C
    G       | | | |                 T T
    G       A G G A
      C T A        G     TGGGGCATTGCCCCTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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