The detailed information of tRNA gene sequence


Sequence ID>SRA1025524
Genome IDSRR035085.33518
Search identical group
Phylum/Class454 Sequencing (SRP001806)
Species
Start position on genome 382
End posion on genome 472
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccccgcttcg
tRNA gene sequence 
GGAGACGTCGCATAGTCCGGCCGAGTGCACCACCCTGCTAAGGTGGAGTTCCCATTAGGG
AACCGAGGGGTTCAAATCCCTCCGTCTCCGCgt
Downstream region at tRNA end position 
ttttnnnnnn
Secondary structure (Cloverleaf model)
>SRA1025524	Ser	GCT
                   g      GCgt ttttnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
    C T G A        C        + | | |     A
  C         T A C G       A G G G G     C
  G         + | | |                 T T
  G         G T G C
    C C G A        A     AGTTCCCATTAGGGAACCG
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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