The detailed information of tRNA gene sequence


Sequence ID>SRA1025977
Genome IDSRR035085.120159
Search identical group
Phylum/Class454 Sequencing (SRP001806)
Species
Start position on genome 439
End posion on genome 346
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
taaagaatat
tRNA gene sequence 
GGAGAGGTACCGAAGTGGTCATAACGGGCTCGCTTGGAGAGCGATTGGGCGGTCAAAAGC
TGTCTCGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
tatatataat
Secondary structure (Cloverleaf model)
>SRA1025977	Ser	GGA
                   t      GCCA tatatataat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
    G T G A        A      | | | | |     G
  G         A G C C       G C G G G     C
  T           | | |                 T T
  C         A C G G
    A T A          G     TGGGCGGTCAAAAGCTGTCTC
                    C   T
                    T - A
                    C - G
                    G - C
                    C - G
                  T       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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