The detailed information of tRNA gene sequence


Sequence ID>SRA1026248
Genome IDSRR035085.171285
Search identical group
Phylum/Class454 Sequencing (SRP001806)
Species
Start position on genome 286
End posion on genome 377
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttattaactT
tRNA gene sequence 
GGAGAGATGCCGGAGTGGTTGAACGGGGGCACCCTGCTAAGGTGTTAGGCCCTTCACGGG
TCTCGAGGGTTCGAATCCCTCTCTCTCCGTCt
Downstream region at tRNA end position 
tcgtccgccg
Secondary structure (Cloverleaf model)
>SRA1026248	Ser	GCT
                   T      GTCt tcgtccgccg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    G T G A        G      | | | | |     G
  G         G G C C       G A G G G     C
  T         |   | |                 T T
  T         C G G G
    G A A          G     TAGGCCCTTCACGGGTCTC
                    G + T
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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