The detailed information of tRNA gene sequence


Sequence ID>C151104240
Genome IDLN827929
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesCandidatus Methylopumilus planktonicus MMS-10A-171 [LN827929]
Start position on genome 410109
End posion on genome 410182
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
atattgatgt
tRNA gene sequence 
GGCGCGATAGCAAAATGGTTATGCAGCGGCCTGCAAAGCCGTAGACGCCAGTTCGATTCT
GGCTCGCGCCTCCA
Downstream region at tRNA end position 
cttattagta
Secondary structure (Cloverleaf model)
>C151104240	Cys	GCA
                   t      TCCA cttattagta
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     A - T          T T
                    T     C G G T C     A
        A A        A      | | | | |     G
      T     A A C G       G C C A G     C
      G       | | |                 T T
      G     A T G C
        T T        A     AGAC
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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