The detailed information of tRNA gene sequence


Sequence ID>SRA1034210
Genome IDSRR035089.24729
Search identical group
Phylum/Class454 Sequencing (SRP001810)
Species
Start position on genome 295
End posion on genome 205
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tttgttattc
tRNA gene sequence 
GGAGTGGTACTCAAGCGGCTGAAGAGGCGCCCCTGCTAAGGGTGTAGACTGGGAAACTGG
TGCGAGAGTTCAAATCTCTCTCACTCCGCCA
Downstream region at tRNA end position 
tttttaaagg
Secondary structure (Cloverleaf model)
>SRA1034210	Ser	GCT
                   c      GCCA tttttaaagg
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     G + T          T A
                    T     C T C T C     A
      C G A        A      | | | | |     A
    G       A C T C       G A G A G     C
    G         | | |                 T T
    C       A G A G
      T G A        G     TAGACTGGGAAACTGGTGC
                    C - G
                    G + T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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