The detailed information of tRNA gene sequence


Sequence ID>SRA1035218
Genome IDSRR035089.262105
Search identical group
Phylum/Class454 Sequencing (SRP001810)
Species
Start position on genome 280
End posion on genome 189
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ccgtttgatt
tRNA gene sequence 
GGAGGAGAATCGTCTCTGGTGGGACGTCCGGACTTCAAATCCGGGAAGGGCCGTCGGACG
GTCCTTGGTGGGTTCGACTCCCGCTCTCTTCCgcca
Downstream region at tRNA end position 
ctttccgacg
Secondary structure (Cloverleaf model)
>SRA1035218	SeC	TCA
                   t      gcca ctttccgacg
                     G - C
                     G - C
                     A - T
                     G + T
                     G - C
                     A - T
                     G - C
                     A - T          T C
                    A     C G C C C     A
      T C T        T      | + | | |     G
    G       C T G C       G T G G G     C
    G       | | | |                 T T
    T       G A C G
      G G          T     GAAGGGCCGTCGGACGGTCCTTG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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