The detailed information of tRNA gene sequence


Sequence ID>SRA1036086
Genome IDSRR035089.443138
Search identical group
Phylum/Class454 Sequencing (SRP001810)
Species
Start position on genome 182
End posion on genome 108
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
attttttttt
tRNA gene sequence 
GGCGACGTTCGCCAAGTGGTAAGGCAGAGGCCTGCAAAGCCTTTATCACCGGTTCGAATC
CGGTCGTCGCCTTCA
Downstream region at tRNA end position 
ttaaaaataa
Secondary structure (Cloverleaf model)
>SRA1036086	Cys	GCA
                   t      TTCA ttaaaaataa
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T G G C C     A
      G A A        T      | | | | |     G
    T       C C G C       A C C G G     C
    G         |                     T T
    G       A G G C
      T A          A     TATC
                    G + T
                    A - T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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