The detailed information of tRNA gene sequence


Sequence ID>SRA1040165
Genome IDSRR035091.50982
Search identical group
Phylum/Class454 Sequencing (SRP001812)
Species
Start position on genome 260
End posion on genome 188
Amino Acid Ile
Anticodon TAT
Upstream region at tRNA start position 
aatacagcaa
tRNA gene sequence 
GCTCTTTTAGCTCAGTGGTTAGAGCGGTGGTCTTATGAGCCATAGGTCGTGGGTTCAATC
CCCACAAAGAGTAtta
Downstream region at tRNA end position 
ttttccattt
Secondary structure (Cloverleaf model)
>SRA1040165	Ile	TAT
                   a      Atta ttttccattt
                     G + T
                     C - G
                     T - A
                     C - G
                     T - A
                     T - A
                     T - A          C T
                    T     C A C C C     A
      T G A        A      | | | | |     A
    G       C T C G       G T G G G     C
    G       | | | |                 T T
    T       G A G C
      T A          G     AGGTC
                    G + T
                    T - A
                    G - C
                    G - C
                    T + G
                  C       A
                  T       G
                    T A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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