The detailed information of tRNA gene sequence


Sequence ID>SRA1040382
Genome IDSRR035091.87494
Search identical group
Phylum/Class454 Sequencing (SRP001812)
Species
Start position on genome 202
End posion on genome 287
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cctttccgct
tRNA gene sequence 
GGAGAATTGGCGTAATGGTATCGCATCGGCTTGCTAAGTCGTCCAACTGAGAAGTTGTAT
AGGTTCGAATCCTATATTCTCCGCTA
Downstream region at tRNA end position 
atatgtcatt
Secondary structure (Cloverleaf model)
>SRA1040382	Ser	GCT
                   t      GCTA atatgtcatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     T - A          T A
                    T     T A T C C     A
        A A        G      | | | | |     G
      T     T G C G       A T A G G     C
      G       | | |                 T T
      G     T C G C
        T A        A     CCAACTGAGAAGTTGT
                    T   T
                    C - G
                    G - C
                    G + T
                    C - G
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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