The detailed information of tRNA gene sequence


Sequence ID>SRA1040552
Genome IDSRR035091.114168
Search identical group
Phylum/Class454 Sequencing (SRP001812)
Species
Start position on genome 548
End posion on genome 476
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
nnnnnatcat
tRNA gene sequence 
GGTTGCTTAGCTCAGTGGTAGAGCGCTCCGTTCACATCGGAGAGGTCAGTGGTTCAAATC
CACTAGCGACCACtt
Downstream region at tRNA end position 
ttaaaaatgg
Secondary structure (Cloverleaf model)
>SRA1040552	Val	CAC
                   t      ACtt ttaaaaatgg
                     G - C
                     G - C
                     T - A
                     T + G
                     G - C
                     C - G
                     T - A          T A
                    T     T C A C C     A
        G A        A      | | | | |     A
      T     C T C G       A G T G G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     AGGTC
                    C - G
                    T - A
                    C - G
                    C - G
                    G - C
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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