The detailed information of tRNA gene sequence


Sequence ID>SRA1040708
Genome IDSRR035091.135453
Search identical group
Phylum/Class454 Sequencing (SRP001812)
Species
Start position on genome 10
End posion on genome 104
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
naattaacat
tRNA gene sequence 
GGGAATGTATGTGGTCCGGTGGCCACTGCAGCCTTCAAAGCTGTTATGCCGGTGGAGAGC
CGGCGGATAGGTTCGACTCCTATACATTCCCGCAA
Downstream region at tRNA end position 
gaattcttga
Secondary structure (Cloverleaf model)
>SRA1040708	SeC	TCA
                   t      GCAA gaattcttga
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     T - A
                     G - C
                     T - A          T C
                    A     T A T C C     A
      C C T        T      | | | | |     G
    G       G G T G       A T A G G     C
    G       | | | |                 T T
    T       C C A C
      G G          T     TATGCCGGTGGAGAGCCGGCGG
                    G + T
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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