The detailed information of tRNA gene sequence


Sequence ID>SRA1041171
Genome IDSRR035091.208508
Search identical group
Phylum/Class454 Sequencing (SRP001812)
Species
Start position on genome 128
End posion on genome 53
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaagaggcaa
tRNA gene sequence 
AGCGGAGTAGAGTAATGGTTACTCGTCAGTCTCATAAACTGAAATAATGCCAGTTCAAAT
CTGGTCTCCGCAACCA
Downstream region at tRNA end position 
aactaggcga
Secondary structure (Cloverleaf model)
>SRA1041171	Met	CAT
                   a      ACCA aactaggcga
                     A   A
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T G G T C     A
        A A        A      + | | | |     A
      T     T G A G       G C C A G     C
      G     | | | |                 T T
      G     A C T C
        T T        G     AATAAT
                    T - A
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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