The detailed information of tRNA gene sequence


Sequence ID>SRA1041182
Genome IDSRR035091.209676
Search identical group
Phylum/Class454 Sequencing (SRP001812)
Species
Start position on genome 183
End posion on genome 96
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aatataatat
tRNA gene sequence 
GGAGAGGTGGCTTGAGCGGTCGAAAGCAGCACCCTGCTAAGGTGTTGATTCTTACGGGAT
CCAAGGGTTCGAATCCCTTCCTCTCCGCag
Downstream region at tRNA end position 
tttgttaaaa
Secondary structure (Cloverleaf model)
>SRA1041182	Ser	GCT
                   t      GCag tttgttaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
    C G A G        G      | | | | |     G
  G         T T C G       A A G G G     C
  G         | | | |                 T T
  T         A A G C
    C G A          A     TGATTCTTACGGGATCC
                    G + T
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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