The detailed information of tRNA gene sequence


Sequence ID>SRA1042121
Genome IDSRR035091.341854
Search identical group
Phylum/Class454 Sequencing (SRP001812)
Species
Start position on genome 148
End posion on genome 239
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tccggaataa
tRNA gene sequence 
GGAGAAATGCCAGAGTGGTCGAATGGGACGGTTTCGAAAACCGTTGTCGCCTTTAAAAGT
GACCCAGGGTTCGAATCCCTGTTTCTCCGCAA
Downstream region at tRNA end position 
ttttttcaaa
Secondary structure (Cloverleaf model)
>SRA1042121	Ser	CGA
                   a      GCAA ttttttcaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     A - T          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G A C C       C A G G G     C
    G         | | |                 T T
    T       A T G G
      C G A        G     TGTCGCCTTTAAAAGTGACC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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