The detailed information of tRNA gene sequence


Sequence ID>SRA1042556
Genome IDSRR035091.408525
Search identical group
Phylum/Class454 Sequencing (SRP001812)
Species
Start position on genome 411
End posion on genome 337
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
nnnnnaacaa
tRNA gene sequence 
AGGTCCATAGTGTCAGCGGTAGCACGTCGGTCTCCAAAACCGAAAGGAGGGGTTCAAATC
CTCTTGGACCTGCCA
Downstream region at tRNA end position 
ttttaggatt
Secondary structure (Cloverleaf model)
>SRA1042556	Trp	CCA
                   a      GCCA ttttaggatt
                     A - T
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     A - T          T A
                    T     T C T C C     A
      G A C        A      | | + | |     A
    C       T G T G       A G G G G     C
    G       + | | |                 T T
    G       G C A C
      T A          G     AAGG
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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