The detailed information of tRNA gene sequence


Sequence ID>SRA1042565
Genome IDSRR035091.409503
Search identical group
Phylum/Class454 Sequencing (SRP001812)
Species
Start position on genome 384
End posion on genome 461
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
tatatgttaa
tRNA gene sequence 
GGGCCCATAGCTCAGTTGGTTAGAGCACTTGCATGGCATGCAAGAGGTTCGCAAGTTCGA
ATCTTGTTGGGTCCACTA
Downstream region at tRNA end position 
gtatttaatc
Secondary structure (Cloverleaf model)
>SRA1042565	Ala	GGC
                   a      ACTA gtatttaatc
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     T G T T C     A
      T G A        A      + | | | |     G
    T       C T C G       G C A A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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