The detailed information of tRNA gene sequence


Sequence ID>SRA1042617
Genome IDSRR035091.417152
Search identical group
Phylum/Class454 Sequencing (SRP001812)
Species
Start position on genome 170
End posion on genome 259
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gcaacaaatt
tRNA gene sequence 
GGAGAGGTGTCCGAGTGGCCGAAGGAGCTTGATTGGAAATCAAGTATACGTGCAAACGTA
TCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
tccgccttcg
Secondary structure (Cloverleaf model)
>SRA1042617	Ser	GGA
                   t      GCCA tccgccttcg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    C       A G G A
      C G A        G     TATACGTGCAAACGTATC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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