The detailed information of tRNA gene sequence


Sequence ID>SRA1042932
Genome IDSRR035091.469682
Search identical group
Phylum/Class454 Sequencing (SRP001812)
Species
Start position on genome 193
End posion on genome 102
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aaatattcat
tRNA gene sequence 
GGAGAGGTGGCTCGAGCTGGTTGAAGGCGTTGCTCTCGAAAAGCAATAGATCAGAAATGG
TCTCGAGGGTTCGAATCCCTCCCTCTTCGCAA
Downstream region at tRNA end position 
ataaaaaagc
Secondary structure (Cloverleaf model)
>SRA1042932	Ser	CGA
                   t      GCAA ataaaaaagc
                     G - C
                     G + T
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    C G A G        G      | | | | |     G
  T         C T C G       G A G G G     C
  G           + | |                 T T
  G         A G G C
    T T G A        G     TAGATCAGAAATGGTCTC
                    T - A
                    T - A
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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