The detailed information of tRNA gene sequence


Sequence ID>SRA1042993
Genome IDSRR035092.17086
Search identical group
Phylum/Class454 Sequencing (SRP001813)
Species
Start position on genome 175
End posion on genome 84
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position
taagaagtgt
tRNA gene sequence
GGAGAGGTGGCAGAGTGGTCGAATGCGGCGGTCTTGAAAACCGTTATCTCGCGAAATCGG
GATCATGGGTTCGAATCCCATCCTCTCCTCCA
Downstream region at tRNA end position
tccttcgtta
Secondary structure (Cloverleaf model)
>SRA1042993	Ser	TGA
                   t      TCCA tccttcgtta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T A C C C     A
      T G A        G      | | | | |     G
    G       G A C G       A T G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        G     TATCTCGCGAAATCGGGATC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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