The detailed information of tRNA gene sequence


Sequence ID>SRA1043457
Genome IDSRR035092.119073
Search identical group
Phylum/Class454 Sequencing (SRP001813)
Species
Start position on genome 229
End posion on genome 320
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ggcagtacta
tRNA gene sequence 
GGAAGGGTGGCTGAGATGGCTTAAGGCATCGTCCTGCTAAGGCGAAAGGCCCTTAACTGG
GTCCGAGGGTTCGAATCCCTCTCCTTCCTCCA
Downstream region at tRNA end position 
ataaaatgtt
Secondary structure (Cloverleaf model)
>SRA1043457	Ser	GCT
                   a      TCCA ataaaatgtt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G + T          T A
                    T     C T C C C     A
    T A G A        G      | | | | |     G
  G         G T C G       G A G G G     C
  G           + | |                 T T
  C         A G G C
    T T A          A     AAGGCCCTTAACTGGGTCC
                    T - A
                    C - G
                    G - C
                    T + G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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